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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Andy Seminick | 24th | Tied for 1st | 24th | |
| First Basemen | Danny Walton | 19th | Tied for 1st | 19th | |
| Second Basemen | Danny Espinosa | 19th | Tied for 1st | 19th | |
| Third Basemen | Mike Sharperson | 11th | Tied for 1st | 11th | |
| Shortstops | Rey Ordonez | 20th | Tied for 1st | 20th | |
| Left Fielders | Chris Gwynn | 4th | Tied for 1st | 4th | |
| Center Fielders | Michael Bourn | 6th | Tied for 1st | 6th | |
| Right Fielders | Ed Coleman | 5th | Tied for 1st | 5th | |
| Starting Pitchers | Joe Bowman | 12th | Tied for 1st | 12th | |
| Relievers | Walter Moser | 2nd | Tied for 1st | 2nd | |
| Closers | John Boozer | 10th | Tied for 1st | 10th |
