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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Buster Posey | 2nd | Steve O'Neill | Tied for 10th | 2nd |
| First Basemen | Will Clark | 14th | Dominic Smith | Tied for 7th | 8th |
| Second Basemen | Larry Doyle | 11th | David Eckstein | Tied for 6th | 8th |
| Third Basemen | Jim Ray Hart | 16th | Howard Johnson | 2nd | 5th |
| Shortstops | Brandon Crawford | 19th | Chico H Fernández | 17th | 19th |
| Left Fielders | Don Buford | 17th | Charlie Hamburg | 13th | 14th |
| Center Fielders | Willie Mays | 4th | Kyle Tucker | 4th | 3rd |
| Right Fielders | Johnny Callison | 13th | Tied for 15th | 19th | |
| Starting Pitchers | Christy Mathewson | 19th | Masahiro Tanaka | 17th | 19th |
| Relievers | Kent Tekulve | 3rd | Jeff Parrett | 8th | 3rd |
| Closers | Brian Wilson | 7th | Jeff Parrett | 2nd | 5th |
